Basic Information
Locus ID:
gene.Cymno13g03140
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr13 | 2639145 | 2649371 | + | gene.Cymno13g03140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 93,359.14 Da | 35.70 | 88.83 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 508 | 770 | 2.19642E-93 | - |
| Pfam | PF11721 | Malectin domain | 234 | 419 | 1.1E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 505 | 769 | 2.3E-43 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 6 | 28 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 126 | 147 | 0.077 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 222 | 1.25E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 770 | 3.78E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 475 | 577 | 7.5E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 235 | 424 | 3.3E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 234 | 3.0E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 578 | 781 | 6.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 90 | 1.6E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 502 | 770 | 1.8E-28 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 126 | 148 | 7.427029 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 502 | 776 | 37.601398 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 622 | 634 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 817 | 845 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_029116218.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A443PVK3 | Putative LRR receptor-like serine/threonine-protein kinase OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02409000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology