Basic Information
Locus ID:
gene.Cymno13g01760
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr13 | 1180756 | 1182983 | + | gene.Cymno13g01760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 72,559.76 Da | 43.21 | 90.68 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 196 | 232 | 1.116E-4 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 391 | 631 | 8.7E-38 | IPR000719 |
| Pfam | PF01476 | LysM domain | 197 | 225 | 1.0E-4 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 196 | 240 | 2.88E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 353 | 635 | 3.93E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 431 | 5.6E-15 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 181 | 249 | 1.5E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 646 | 8.6E-52 | - |
| SMART | SM00257 | LysM_2 | 196 | 240 | 0.036 | IPR018392 |
| SMART | SM00257 | LysM_2 | 128 | 176 | 0.91 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 195 | 239 | 9.279313 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 642 | 32.527294 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_038984149.1 | protein LYK5 [Phoenix dactylifera] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9ALH3 | protein LYK5 OS=Phoenix dactylifera OX=42345 GN=LOC103701426 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology