Basic Information
Locus ID:
gene.Cymno13g01750
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr13 | 1171902 | 1174230 | + | gene.Cymno13g01750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 71,759.56 Da | 39.09 | 91.81 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 194 | 237 | 3.6001E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 200 | 238 | 9.2E-8 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 379 | 620 | 7.9E-35 | IPR000719 |
| SUPERFAMILY | SSF54106 | LysM domain | 194 | 238 | 3.66E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 624 | 1.37E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 421 | 640 | 2.3E-49 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 193 | 248 | 2.9E-8 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 420 | 7.4E-16 | - |
| SMART | SM00257 | LysM_2 | 194 | 238 | 0.0016 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 631 | 30.46373 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 193 | 237 | 10.456657 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 268 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_038984149.1 | protein LYK5 [Phoenix dactylifera] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9ALH3 | protein LYK5 OS=Phoenix dactylifera OX=42345 GN=LOC103701426 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology