Basic Information
Locus ID:
gene.Cymno13g00600
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr13 | 475979 | 480288 | - | gene.Cymno13g00600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 78,880.62 Da | 55.05 | 86.10 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 171 | 259 | 2.8E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 369 | 630 | 3.9E-29 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 54 | 147 | 2.0E-18 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 656 | 1.16E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 158 | 262 | 5.8E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 46 | 149 | 6.5E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 440 | 1.9E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 639 | 1.4E-40 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 156 | 262 | 15.511224 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 47 | 149 | 19.892441 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 639 | 28.145754 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 667 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.3 | - | 0 |
| RefSeq | XP_042457920.1 | putative receptor-like protein kinase At4g00960 [Zingiber officinale] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NPU1 | Receptor-like protein kinase, putative,expressed OS=Zostera marina OX=29655 GN=ZOSMA_75G00360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g00600, gene.Cymno17g06150 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g29460 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g01480 |
| Zosteraceae | Zostera marina | 1 | Zosma03g31780.v3.1 |