Basic Information
Locus ID:
gene.Cymno12g04410
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Probably inactive receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr12 | 17958899 | 17961699 | + | gene.Cymno12g04410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 74,538.51 Da | 42.99 | 85.94 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 545 | 1.4E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 642 | 2.52E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 653 | 5.4E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 467 | 5.0E-16 | - |
| SMART | SM00219 | tyrkin_6 | 397 | 639 | 0.002 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 679 | 10.294513 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010919040.1 | probably inactive receptor-like protein kinase At2g46850 [Elaeis guineensis] | 0 |
| Q8S8N4 | Probably inactive receptor-like protein kinase At2g46850 OS=Arabidopsis thaliana OX=3702 GN=At2g46850 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9R3K8 | probably inactive receptor-like protein kinase At2g46850 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043259 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1590 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022759 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g001930 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg3787, Sbi_jg49041, Sbi_jg49042 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6193 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000681 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl10794, Sgl16147 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000034990, gene:ENSEOMG00000049469 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0004260, CQ.Regalona.r1.2BG0027060 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30006680 |
| Apiaceae | Apium graveolens | 1 | Ag7G01393 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G008370, COCNU_07G008380 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103720391 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2178.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G03789 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G46850.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001355m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g28870.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g030430.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0220 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0229 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g04410 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6184, nbisL1-mrna-9561 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.601 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020634 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G12150 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2049, BH09.2203, CH09.2351 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0306400, gene-QOZ80_4BG0337400 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0098610.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco07G013960, Oco08G013470 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g21090.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G197700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0300315 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr23G005760, Chr25G004810, Chr25G004840, Chr26G013830 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G069900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG002350, gene_TRIDC2BG002550 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G023200.1, TraesCS2B02G033300.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb427960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-22648 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20297 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG19.1348, evm.TU.LG24.1342 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.695 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10654 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3642 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11332 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.634 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013007 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10192 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7328 |
| Salicaceae | Populus euphratica | 1 | populus_peu31463 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132628848 |
| Solanaceae | Solanum chilense | 1 | SOLCI007219700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107001906 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_1332 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G2441 |
| Zosteraceae | Zostera marina | 1 | Zosma05g00420.v3.1 |