Basic Information
Locus ID:
gene.Cymno12g02450
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr12 | 3210868 | 3214043 | + | gene.Cymno12g02450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 111,811.38 Da | 32.95 | 96.84 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 688 | 964 | 1.2929E-92 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 566 | 587 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 520 | 540 | 0.8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 685 | 898 | 5.9E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 62 | 3.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 389 | 586 | 4.71E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 962 | 1.3E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 441 | 7.61E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 614 | 2.1E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 662 | 762 | 6.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 178 | 3.4E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 969 | 2.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 282 | 1.5E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 682 | 963 | 5.2E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 517 | 540 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 259 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 541 | 565 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 306 | 330 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 162 | 186 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 682 | 968 | 36.456547 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 688 | 713 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 985 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 996 | 1024 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_008794105.2 | receptor-like protein kinase 5 [Phoenix dactylifera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C8P3 | receptor-like protein kinase 5 OS=Phoenix dactylifera OX=42345 GN=LOC103710231 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology