Basic Information
Locus ID:
gene.Cymno12g00980
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr12 | 578841 | 582154 | - | gene.Cymno12g00980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 82,412.08 Da | 41.71 | 78.75 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 164 | 1.89569E-41 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 462 | 712 | 1.0E-37 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 23 | 143 | 4.4E-10 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 143 | 4.69E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 716 | 1.89E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 731 | 1.8E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 20 | 162 | 3.9E-12 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 439 | 530 | 6.0E-25 | - |
| SMART | SM00220 | serkin_6 | 458 | 725 | 8.6E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 458 | 721 | 33.898293 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 576 | 588 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 207 | - | - |
| Coils | Coil | Coil | 330 | 350 | - | - |
| Coils | Coil | Coil | 404 | 434 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_008808214.2 | U-box domain-containing protein 52 isoform X1 [Phoenix dactylifera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843VJ39 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_027092 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology