Basic Information
Locus ID:
gene.Cymno12g00500
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr12 | 308200 | 312521 | - | gene.Cymno12g00500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 50,879.17 Da | 59.73 | 93.71 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 43 | 416 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 96 | 416 | 1.6E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 420 | 1.46E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 426 | 1.5E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 165 | 2.1E-29 | - |
| SMART | SM00220 | serkin_6 | 85 | 416 | 4.7E-64 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 416 | 33.559078 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32660.3 | Protein kinase superfamily protein. Encodes protein kinase AME3. | 0 |
| RefSeq | XP_010925087.1 | serine/threonine-protein kinase AFC3 isoform X3 [Elaeis guineensis] | 0 |
| P51568 | Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana OX=3702 GN=AFC3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9NLC0 | Protein kinase superfamily protein OS=Zostera marina OX=29655 GN=ZOSMA_84G00070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology