Basic Information
Locus ID:
gene.Cymno11g09460
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr11 | 18949384 | 18954884 | - | gene.Cymno11g09460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 68,152.69 Da | 45.33 | 99.84 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 126 | 146 | 0.074 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 299 | 567 | 4.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 5.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 199 | 1.56E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 569 | 8.09E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 216 | 4.3E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 372 | 1.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 373 | 585 | 1.0E-63 | - |
| SMART | SM00220 | serkin_6 | 297 | 568 | 3.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 575 | 36.2304 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010925612.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Elaeis guineensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RFA5 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105048109 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology