Basic Information
Locus ID:
gene.Cymno11g08410
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr11 | 17927582 | 17934728 | - | gene.Cymno11g08410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 181,263.34 Da | 45.45 | 76.89 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1343 | 1606 | 5.12089E-134 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 310 | 581 | 5.89853E-116 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 333 | 567 | 1.3E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1382 | 1548 | 2.1E-31 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 376 | 547 | 1.07E-38 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1321 | 1606 | 9.81E-81 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1303 | 1463 | 6.0E-35 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 375 | 547 | 2.5E-49 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1466 | 1607 | 9.0E-41 | - |
| SMART | SM00330 | PIPK_2 | 1316 | 1607 | 2.7E-115 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1282 | 1606 | 58.064495 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1262 | 1282 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_029122882.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X2 [Elaeis guineensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P8C7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Zostera marina OX=29655 GN=ZOSMA_32G00730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology