Basic Information
Locus ID:
gene.Cymno11g08330
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr11 | 17763461 | 17767586 | - | gene.Cymno11g08330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 54,441.46 Da | 34.76 | 93.10 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 364 | 434 | 2.4E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 3.0E-83 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 347 | 6.61E-89 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 352 | 1.4E-117 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 448 | 9.7E-10 | - |
| SMART | SM00768 | X8_cls | 363 | 448 | 2.5E-47 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_039114553.1 | glucan endo-1,3-beta-glucosidase 3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P8J0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_32G00790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology