Basic Information
Locus ID:
gene.Cymno11g07960
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
amino acid
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr11 | 17314370 | 17316091 | + | gene.Cymno11g07960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 62,336.54 Da | 30.36 | 114.07 | 0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 507 | 557 | 6.3E-17 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 69 | 468 | 4.5E-44 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 64 | 493 | 2.6E-91 | - |
| PIRSF | PIRSF006060 | AA_transporter | 441 | 569 | 1.7 | - |
| PIRSF | PIRSF006060 | AA_transporter | 56 | 446 | 7.0E-67 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_020682634.1 | cationic amino acid transporter 1 [Dendrobium catenatum] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T3B0A6 | AA_permease_C domain-containing protein OS=Dendrobium nobile OX=94219 GN=KFK09_016297 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology