HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene.Cymno11g02870
Species & Taxonomic ID: Cymodocea nodosa & 55448
Genome Assembly: GCA_036874045.1
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
Chr11 1846476 1868130 + gene.Cymno11g02870
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.11 99,134.74 Da 45.29 75.47 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06610 STKc_OSR1_SPAK 226 472 5.40345E-162 -
Pfam PF00069 Protein kinase domain 233 472 1.0E-55 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 227 473 1.75E-74 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 225 290 8.6E-20 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 292 523 1.2E-59 -
SMART SM00220 serkin_6 220 472 5.3E-75 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 183 472 43.565948 IPR000719
MobiDBLite mobidb-lite consensus disorder prediction 754 769 - -
MobiDBLite mobidb-lite consensus disorder prediction 687 723 - -
MobiDBLite mobidb-lite consensus disorder prediction 704 718 - -
MobiDBLite mobidb-lite consensus disorder prediction 749 769 - -
Coils Coil Coil 843 877 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K08835 (serine/threonine-protein kinase OSR1/STK39 [EC:2.7.11.1])
Best hit
Source Best Hit ID Description E-value
TAIR AT5G14720.1 Protein kinase superfamily protein. 0
RefSeq XP_010936724.1 serine/threonine-protein kinase BLUS1 isoform X1 [Elaeis guineensis] 0
Swiss-Prot Q551H4 Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum OX=44689 GN=fray2 PE=3 SV=1 0
TrEMBL A0A1D1XK20 Serine/threonine-protein kinase fray2 OS=Anthurium amnicola OX=1678845 GN=fray2_2 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 7 jg17793, jg18360, jg19841, jg25524, jg37390, jg4999, jg7474
Aizoaceae Mesembryanthemum crystallinum 4 gene_12725, gene_14633, gene_7686, gene_9539
Amaranthaceae Atriplex hortensis 3 Ah003976, Ah007161, Ah015687
Amaranthaceae Beta vulgaris 2 BVRB_5g103910, BVRB_8g189300
Amaranthaceae Salicornia bigelovii 6 Sbi_jg19151, Sbi_jg24122, Sbi_jg37571, Sbi_jg40849 ...
Sbi_jg50811, Sbi_jg7962
Amaranthaceae Salicornia europaea 4 Seu_jg12073, Seu_jg2359, Seu_jg2362, Seu_jg5412
Amaranthaceae Suaeda aralocaspica 3 GOSA_00010720, GOSA_00014826, GOSA_00022803
Amaranthaceae Suaeda glauca 9 Sgl20824, Sgl26208, Sgl43529, Sgl43531, Sgl48325, Sgl48326 ...
Sgl52332, Sgl57623, Sgl57625
Amaranthaceae Chenopodium album 8 gene:ENSEOMG00000007701, gene:ENSEOMG00000010598 ...
gene:ENSEOMG00000023017, gene:ENSEOMG00000023916, gene:ENSEOMG00000028957, gene:ENSEOMG00000033955, gene:ENSEOMG00000042048, gene:ENSEOMG00000047790
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.4AG0015420, CQ.Regalona.r1.4BG0016240 ...
CQ.Regalona.r1.5AG0005020, CQ.Regalona.r1.5BG0005420, CQ.Regalona.r1.8AG0012230, CQ.Regalona.r1.8BG0011460
Anacardiaceae Pistacia vera 3 pistato.v30022420, pistato.v30130780, pistato.v30133470
Apiaceae Apium graveolens 4 Ag11G04751, Ag3G00857, Ag4G00058, Ag4G00778
Arecaceae Cocos nucifera 3 COCNU_07G006550, COCNU_11G012390, COCNU_14G004940
Arecaceae Phoenix dactylifera 8 gene-LOC103701190, gene-LOC103701990, gene-LOC103707310 ...
gene-LOC103707657, gene-LOC103710483, gene-LOC103711518, gene-LOC103717369, gene-LOC120103718
Asparagaceae Asparagus officinalis 4 AsparagusV1_01.2772.V1.1, AsparagusV1_01.29.V1.1 ...
AsparagusV1_01.3439.V1.1, AsparagusV1_04.3392.V1.1
Asteraceae Flaveria trinervia 7 Ftri10G25073, Ftri13G03335, Ftri17G14776, Ftri18G26827 ...
Ftri2G19268, Ftri3G30526, Ftri9G03040
Brassicaceae Arabidopsis thaliana 6 AT1G23700.1, AT1G70430.1, AT1G79640.1, AT4G10730.1 ...
AT4G24100.1, AT5G14720.1
Brassicaceae Eutrema salsugineum 5 Thhalv10012878m.g.v1.0, Thhalv10018218m.g.v1.0 ...
Thhalv10018357m.g.v1.0, Thhalv10024570m.g.v1.0, Thhalv10028480m.g.v1.0
Brassicaceae Schrenkiella parvula 5 Sp5g25510.v2.2, Sp5g34710.v2.2, Sp6g06760.v2.2 ...
Sp6g29320.v2.2, Sp7g22060.v2.2
Brassicaceae Brassica nigra 9 BniB02g048050.2N, BniB03g048060.2N, BniB05g013120.2N ...
BniB05g023820.2N, BniB05g058290.2N, BniB05g067840.2N, BniB06g051020.2N, BniB06g067970.2N, BniB08g051800.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq02G1831, Ceq03G0638, Ceq05G0647
Casuarinaceae Casuarina glauca 3 Cgl02G1910, Cgl03G0732, Cgl05G0661
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno01g07480, gene.Cymno09g07570, gene.Cymno10g07020 ...
gene.Cymno11g02870
Dunaliellaceae Dunaliella salina 1 Dusal.0077s00025.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate03g03510, gene.Thate07g07410, gene.Thate08g18740
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-4656, nbisL1-mrna-6843, nbisL1-mrna-7499
Nitrariaceae Nitraria sibirica 3 evm.TU.LG01.704, evm.TU.LG05.362, evm.TU.LG10.1601
Plantaginaceae Plantago ovata 4 Pov_00005192, Pov_00020087, Pov_00023299, Pov_00032888
Plumbaginaceae Limonium bicolor 5 Lb2G08190, Lb2G08191, Lb2G10964, Lb4G23083, Lb7G33855
Poaceae Echinochloa crus-galli 15 AH01.1574, AH01.5061, AH03.1185, AH06.1465, AH07.3750 ...
AH07.573, BH01.1770, BH06.1478, BH07.3576, BH07.700, CH01.1853, CH06.1615, CH07.3642, CH07.580, Contig786.7
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_2AG0113930, gene-QOZ80_2AG0148620 ...
gene-QOZ80_2BG0156970, gene-QOZ80_2BG0167180, gene-QOZ80_2BG0204000, gene-QOZ80_3AG0230930, gene-QOZ80_3BG0296910, gene-QOZ80_6AG0520340, gene-QOZ80_6BG0472450
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.1HG0050630.1, HORVU.MOREX.r3.4HG0416700.1 ...
HORVU.MOREX.r3.6HG0569550.1, HORVU.MOREX.r3.6HG0623180.1, HORVU.MOREX.r3.7HG0676820.1
Poaceae Lolium multiflorum 4 gene-QYE76_012120, gene-QYE76_021025, gene-QYE76_026061 ...
gene-QYE76_029714
Poaceae Oryza coarctata 9 Oco03G003990, Oco03G023980, Oco04G003930, Oco04G024510 ...
Oco06G000800, Oco11G008900, Oco12G008850, Oco19G008160, Oco20G008020
Poaceae Oryza sativa 5 LOC_Os02g08240.1, LOC_Os02g54900.1, LOC_Os03g02320.1 ...
LOC_Os06g29120.2, LOC_Os10g37480.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G175300, gene-BS78_01G508000 ...
gene-BS78_04G059200, gene-BS78_04G303100, gene-BS78_10G150900
Poaceae Puccinellia tenuiflora 7 Pt_Chr0100819, Pt_Chr0202334, Pt_Chr0202915, Pt_Chr0403924 ...
Pt_Chr0403964, Pt_Chr0502944, Pt_Chr0502986
Poaceae Sporobolus alterniflorus 16 Chr04G006530, Chr06G000600, Chr06G029330, Chr06G034050 ...
Chr07G005090, Chr09G002870, Chr09G017920, Chr0G015770, Chr10G002410, Chr12G000500, Chr13G002110, Chr14G006790, Chr15G001830, Chr15G020560, Chr15G025250, Chr21G006420
Poaceae Thinopyrum elongatum 8 Tel1E01G322500, Tel3E01G185500, Tel4E01G388100 ...
Tel4E01G476500, Tel4E01G648800, Tel6E01G309300, Tel6E01G628000, Tel7E01G417000
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG027610, gene_TRIDC1BG033320 ...
gene_TRIDC5AG078780, gene_TRIDC6AG020750, gene_TRIDC6AG053160, gene_TRIDC6BG026600, gene_TRIDC6BG061710, gene_TRIDC7AG029890, gene_TRIDC7BG020630
Poaceae Triticum aestivum 18 TraesCS1A02G181900.1, TraesCS1B02G199100.2 ...
TraesCS1D02G185000.2, TraesCS4B02G395600.1, TraesCS4B02G398400.3, TraesCS5A02G556400.5, TraesCS6A02G149900.1, TraesCS6A02G353400.1, TraesCS6A02G353500.1, TraesCS6B02G177800.1, TraesCS6B02G386100.1, TraesCS6D02G139200.1, TraesCS6D02G335800.1, TraesCS7A02G078200.1, TraesCS7A02G232300.1, TraesCS7B02G130700.1, TraesCS7D02G232400.1, TraesCSU02G115300.1
Poaceae Zea mays 8 Zm00001eb000920_P004, Zm00001eb043420_P004 ...
Zm00001eb192580_P006, Zm00001eb206610_P002, Zm00001eb220060_P002, Zm00001eb257600_P001, Zm00001eb371710_P001, Zm00001eb382260_P001
Poaceae Zoysia japonica 8 nbis-gene-28850, nbis-gene-3167, nbis-gene-33603 ...
nbis-gene-34414, nbis-gene-36111, nbis-gene-44189, nbis-gene-46937, nbis-gene-4753
Poaceae Zoysia macrostachya 8 Zma_g12301, Zma_g12774, Zma_g14603, Zma_g15529, Zma_g17314 ...
Zma_g2250, Zma_g29653, Zma_g4592
Portulacaceae Portulaca oleracea 6 evm.TU.LG01.2149, evm.TU.LG04.2604, evm.TU.LG04.3217 ...
evm.TU.LG08.186, evm.TU.LG14.1325, evm.TU.LG16.385
Posidoniaceae Posidonia oceanica 3 gene.Posoc03g13670, gene.Posoc04g05550, gene.Posoc06g12640
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_14_RagTag.40, evm.TU.Scaffold_3_RagTag.1894 ...
evm.TU.Scaffold_6_RagTag.155
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-14972, nbisL1-mrna-18369, nbisL1-mrna-2334 ...
nbisL1-mrna-2603
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-11293, nbisL1-mrna-639, nbisL1-mrna-6754
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-130, nbisL1-mrna-3063, nbisL1-mrna-8679
Rhizophoraceae Kandelia candel 3 evm.TU.utg000007l.376, evm.TU.utg000011l.107 ...
evm.TU.utg000019l.83
Rhizophoraceae Kandelia obovata 3 Maker00002115, Maker00007309, Maker00018373
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-11866, nbisL1-mrna-12056, nbisL1-mrna-15927
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-17443
Salicaceae Populus euphratica 5 populus_peu01039, populus_peu03753, populus_peu04152 ...
populus_peu34597, populus_peu34978
Solanaceae Lycium barbarum 8 gene-LOC132599148, gene-LOC132609957, gene-LOC132612083 ...
gene-LOC132621176, gene-LOC132621851, gene-LOC132633106, gene-LOC132634720, gene-LOC132643848
Solanaceae Solanum chilense 5 SOLCI002423600, SOLCI002710000, SOLCI002916500 ...
SOLCI004213300, SOLCI004331400
Solanaceae Solanum pennellii 5 gene-LOC107011318, gene-LOC107012816, gene-LOC107021648 ...
gene-LOC107028803, gene-LOC107028878
Tamaricaceae Reaumuria soongarica 3 MSTRG.14566_chr08_-, gene_14415, gene_14695
Tamaricaceae Tamarix chinensis 4 TC01G3622, TC03G1345, TC06G0134, TC10G2157
Zosteraceae Zostera marina 7 Zosma01g31380.v3.1, Zosma03g26130.v3.1, Zosma05g27090.v3.1 ...
Zosma05g33330.v3.1, Zosma05g33340.v3.1, Zosma06g03030.v3.1, Zosma06g07080.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.