Basic Information
Locus ID:
gene.Cymno10g06900
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr10 | 18685171 | 18688539 | - | gene.Cymno10g06900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 121,487.98 Da | 36.42 | 99.49 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 844 | 1112 | 1.30355E-88 | - |
| Pfam | PF13516 | Leucine Rich repeat | 409 | 424 | 0.65 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 840 | 1038 | 1.9E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 299 | 321 | 0.71 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 78 | 2.6E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 602 | 658 | 4.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 226 | 286 | 7.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 819 | 1110 | 4.45E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 525 | 712 | 4.0E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 119 | 460 | 1.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 462 | 8.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 103 | 1.0E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 799 | 913 | 1.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 914 | 1116 | 3.8E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 336 | 1.2E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 496 | 739 | 3.8E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 622 | 645 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 646 | 670 | 27.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 838 | 1116 | 7.7E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 598 | 621 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 248 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 838 | 1116 | 38.20916 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 844 | 866 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 958 | 970 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_039116940.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NT63 | Receptor-like protein kinase 2 OS=Zostera marina OX=29655 GN=ZOSMA_6G00440 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology