Basic Information
Locus ID:
gene.Cymno09g06990
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 19561619 | 19564776 | + | gene.Cymno09g06990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 111,649.44 Da | 38.81 | 94.01 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 711 | 920 | 3.9E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 2.5E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 527 | 585 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 243 | 301 | 3.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 456 | 516 | 1.9E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 636 | 4.59E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 998 | 4.78E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 310 | 5.1E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 78 | 3.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 689 | 786 | 4.7E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1006 | 8.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 311 | 628 | 3.5E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 79 | 310 | 1.3E-62 | IPR032675 |
| SMART | SM00220 | serkin_6 | 709 | 991 | 4.9E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 1003 | 36.47068 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 715 | 738 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 549 | 562 | 8.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 243 | 256 | 8.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_010939310.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Elaeis guineensis] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NL74 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Zostera marina OX=29655 GN=ZOSMA_92G00750 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology