Basic Information
Locus ID:
gene.Cymno09g06340
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 19117369 | 19119115 | + | gene.Cymno09g06340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 53,630.54 Da | 44.42 | 82.75 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 3.6E-72 | IPR000490 |
| Pfam | PF07983 | X8 domain | 365 | 434 | 1.3E-12 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 347 | 1.06E-70 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 360 | 459 | 4.9E-6 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 352 | 2.4E-104 | - |
| SMART | SM00768 | X8_cls | 364 | 448 | 7.4E-35 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010934539.1 | glucan endo-1,3-beta-glucosidase 4 isoform X1 [Elaeis guineensis] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1Y735 | Glucan endo-1,3-beta-glucosidase 4 OS=Anthurium amnicola OX=1678845 GN=At3g13560_6 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology