Basic Information
Locus ID:
gene.Cymno09g05320
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 18090605 | 18111671 | - | gene.Cymno09g05320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 197,180.86 Da | 46.23 | 77.43 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 369 | 638 | 2.88571E-118 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1440 | 1703 | 1.00363E-138 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1479 | 1644 | 6.5E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 390 | 625 | 4.3E-29 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 30 | 98 | 5.6E-15 | IPR000306 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 434 | 604 | 5.49E-41 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1436 | 1703 | 5.89E-79 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 29 | 100 | 1.87E-17 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 19 | 106 | 2.5E-18 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 433 | 604 | 5.4E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1402 | 1560 | 3.5E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1563 | 1704 | 2.5E-40 | - |
| SMART | SM00064 | fyve_4 | 25 | 99 | 1.6E-17 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1413 | 1704 | 1.2E-121 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1377 | 1703 | 57.215462 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 33 | 98 | 13.216435 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1357 | 1372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1357 | 1378 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_019704846.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Elaeis guineensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0PGP5 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041983 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology