Basic Information
Locus ID:
gene.Cymno09g03100
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
CIPK23
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 15658303 | 15667612 | - | gene.Cymno09g03100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 51,094.20 Da | 32.04 | 83.31 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14663 | STKc_SnRK3 | 23 | 278 | 7.38947E-174 | - |
| CDD | cd12195 | CIPK_C | 324 | 432 | 7.64523E-43 | - |
| Pfam | PF03822 | NAF domain | 320 | 380 | 8.8E-21 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 24 | 279 | 9.7E-77 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 293 | 5.26E-94 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 103 | 2.3E-34 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 317 | 443 | 8.1E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 285 | 1.5E-63 | - |
| SMART | SM00220 | serkin_6 | 24 | 279 | 2.4E-108 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 279 | 52.569305 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 318 | 342 | 12.389291 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 143 | 155 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30270.2 | - | 0 |
| RefSeq | XP_010275072.1 | PREDICTED: CBL-interacting serine/threonine-protein kinase 23-like isoform X2 [Nelumbo nucifera] | 0 |
| Q6ZLP5 | CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK23 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8BEE3 | non-specific serine/threonine protein kinase OS=Nelumbo nucifera OX=4432 GN=LOC104610244 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology