Basic Information
Locus ID:
gene.Cymno09g02720
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 14744456 | 14748193 | - | gene.Cymno09g02720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 35,036.25 Da | 52.65 | 84.77 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 24 | 65 | 7.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 80 | 1.44E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 68 | 191 | 1.9E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 64 | 2.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 64 | 9.709425 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_039145379.1 | F-box protein SKIP28 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A199UND6 | F-box protein SKIP28 OS=Ananas comosus OX=4615 GN=ACMD2_05872 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology