Basic Information
Locus ID:
gene.Cymno08g07330
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 21506282 | 21517725 | - | gene.Cymno08g07330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 198,264.94 Da | 43.94 | 77.50 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1472 | 1731 | 5.39773E-134 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 318 | 586 | 5.17564E-111 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1511 | 1674 | 1.1E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 339 | 576 | 1.6E-21 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1461 | 1731 | 4.64E-81 | - |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 340 | 572 | 1.53E-5 | IPR027410 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 384 | 552 | 3.14E-28 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1593 | 1732 | 5.1E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 383 | 552 | 4.8E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1432 | 1590 | 8.1E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1445 | 1732 | 8.6E-93 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1412 | 1731 | 57.104717 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1110 | 1136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 288 | - | - |
| Coils | Coil | Coil | 1163 | 1183 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_010910903.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [Elaeis guineensis] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9PWP8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Zostera marina OX=29655 GN=ZOSMA_161G00870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology