Basic Information
Locus ID:
gene.Cymno08g06650
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 20911812 | 20914319 | + | gene.Cymno08g06650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 86,147.28 Da | 47.00 | 83.78 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 488 | 769 | 4.67001E-91 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 249 | 272 | 2.6E-5 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 485 | 765 | 9.6E-44 | IPR001245 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 215 | 236 | 5.7E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 768 | 6.47E-74 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 93 | 316 | 1.57E-22 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 29 | 201 | 1.6E-5 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 777 | 1.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 563 | 1.0E-26 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 202 | 324 | 6.1E-17 | IPR009091 |
| SMART | SM00220 | serkin_6 | 482 | 746 | 4.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 482 | 772 | 37.686203 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 488 | 509 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 377 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_050268560.1 | serine/threonine-protein kinase-like protein CCR4 [Quercus robur] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NLM7 | Putative Kinase OS=Zostera marina OX=29655 GN=ZOSMA_83G00450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology