Basic Information
Locus ID:
gene.Cymno08g05220
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 19847611 | 19849520 | + | gene.Cymno08g05220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 44,977.63 Da | 61.37 | 96.05 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 126 | 329 | 6.0E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 400 | 3.01E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 206 | 2.2E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 207 | 404 | 8.5E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 121 | 405 | 30.025576 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13290.2 | Protein kinase superfamily protein. Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels. | 0 |
| RefSeq | XP_010926863.1 | inactive leucine-rich repeat receptor-like protein kinase CORYNE [Elaeis guineensis] | 0 |
| Q9LYU7 | Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana OX=3702 GN=CRN PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RIL1 | inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049024 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34452 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17974 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014027 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g149750 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42612, Sbi_jg45232 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26935 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002677 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35445, Sgl40857 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001570, gene:ENSEOMG00000012240 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002030, CQ.Regalona.r1.6BG0002020 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166060 |
| Apiaceae | Apium graveolens | 1 | Ag5G02326 |
| Arecaceae | Cocos nucifera | 1 | scaffold006649G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC108511901 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.1567.V1.1, AsparagusV1_06.913.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G13290.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013721m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g30700.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g049190.2N, BniB05g025030.2N, BniB08g006230.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0940 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0985 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g05220 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g10360 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5803 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1969 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019546 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G00371 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.4388, BH02.4421, CH02.4471 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0045180, gene-QOZ80_1BG0095170 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0312290.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057569 |
| Poaceae | Oryza coarctata | 2 | Oco01G028980, Oco02G030130 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g70260.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G389900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0600610, Pt_Chr0600655 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G002010, Chr05G032470, Chr08G018830 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G697500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG062460, gene_TRIDC3BG070150 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G441700.1, TraesCS3B02G475600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb142560_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10925, nbis-gene-28273 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g11853, Zma_g9311 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1409, evm.TU.LG05.1930 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g14200 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.925, evm.TU.Scaffold_17_RagTag.61 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-27111, nbisL1-mrna-27298 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10627, nbisL1-mrna-11405 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-14575, nbisL1-mrna-15492 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000001l.516, evm.TU.utg000013l.26 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00002616, Maker00006523 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-11135, nbisL1-mrna-6936 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16049, nbisL1-mrna-17612 |
| Salicaceae | Populus euphratica | 2 | populus_peu03920, populus_peu34746 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132640795 |
| Solanaceae | Solanum chilense | 1 | SOLCI000945100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020343 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.20164_chr07_- |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G3685, TC04G0008 |
| Zosteraceae | Zostera marina | 1 | Zosma05g09280.v3.1 |