Basic Information
Locus ID:
gene.Cymno08g03440
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 18122165 | 18123969 | - | gene.Cymno08g03440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 59,984.85 Da | 74.90 | 50.82 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 109 | 252 | 8.4E-20 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 112 | 202 | 3.0E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 403 | - | - |
| Coils | Coil | Coil | 420 | 447 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_039126136.1 | stress response protein NST1-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A0K9PVS6 | Sequence-specific DNA binding transcription factor OS=Zostera marina OX=29655 GN=ZOSMA_166G00570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology