Basic Information
Locus ID:
gene.Cymno08g03420
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Pyruvate kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 18106567 | 18117884 | - | gene.Cymno08g03420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 57,675.08 Da | 28.82 | 100.64 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00224 | Pyruvate kinase, barrel domain | 30 | 376 | 1.8E-92 | IPR015793 |
| Pfam | PF02887 | Pyruvate kinase, alpha/beta domain | 395 | 519 | 1.3E-23 | IPR015795 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | 6 | 376 | 2.06E-77 | IPR015813 |
| SUPERFAMILY | SSF52935 | PK C-terminal domain-like | 358 | 522 | 1.44E-22 | IPR036918 |
| SUPERFAMILY | SSF50800 | PK beta-barrel domain-like | 96 | 187 | 9.94E-8 | IPR011037 |
| Gene3D | G3DSA:2.40.33.10 | - | 97 | 201 | 1.8E-103 | IPR015806 |
| Gene3D | G3DSA:3.20.20.60 | - | 30 | 362 | 1.8E-103 | IPR040442 |
| Gene3D | G3DSA:3.40.1380.20 | - | 363 | 525 | 4.1E-42 | IPR036918 |
| TIGRFAM | TIGR01064 | pyruv_kin: pyruvate kinase | 30 | 516 | 4.7E-109 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 253 | 279 | 9.6E-45 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 348 | 364 | 9.6E-45 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 85 | 101 | 9.6E-45 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 280 | 304 | 9.6E-45 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 329 | 347 | 9.6E-45 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 221 | 235 | 9.6E-45 | IPR001697 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00230 (Purine metabolism)
map00230 (Purine metabolism)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Module:
Reaction:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52990.1 | Pyruvate kinase family protein. | 0 |
| RefSeq | XP_008777882.1 | pyruvate kinase 1, cytosolic isoform X1 [Phoenix dactylifera] | 0 |
| B8BJ39 | Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6V7P0G2 | Pyruvate kinase OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS7531 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology