Basic Information
Locus ID:
gene.Cymno08g00930
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
CRM domain-containing protein At3g25440
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 1024244 | 1030245 | - | gene.Cymno08g00930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 59,225.51 Da | 44.22 | 71.10 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 160 | 300 | 1.2E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 144 | 319 | 9.29E-38 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 168 | 322 | 9.6E-30 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 159 | 319 | 31.85759 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 365 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_010251054.1 | PREDICTED: NAC domain-containing protein 8 [Nelumbo nucifera] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S4N9H1 | NAC domain-containing protein 8 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00261600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology