Basic Information
Locus ID:
gene.Cymno07g13030
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 24193691 | 24196790 | - | gene.Cymno07g13030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 58,306.29 Da | 34.78 | 71.04 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 253 | 293 | 8.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 253 | 296 | 2.13E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 406 | 2.5E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 251 | 292 | 2.5E-5 | - |
| SMART | SM00367 | LRR_CC_2 | 342 | 367 | 89.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 316 | 341 | 0.96 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 246 | 293 | 8.517177 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_010248857.1 | PREDICTED: F-box protein SKIP14 [Nelumbo nucifera] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P0Y1 | F-box domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_4G01920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology