Basic Information
Locus ID:
gene.Cymno07g12800
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 24078869 | 24081368 | + | gene.Cymno07g12800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 47,924.01 Da | 62.94 | 81.10 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 190 | 244 | 5.38217E-5 | - |
| Pfam | PF02135 | TAZ zinc finger | 270 | 365 | 2.8E-10 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 88 | 185 | 1.8E-4 | IPR000210 |
| SUPERFAMILY | SSF57933 | TAZ domain | 262 | 370 | 2.09E-15 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 87 | 183 | 8.63E-7 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 77 | 185 | 9.0E-9 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 186 | 259 | 3.2E-12 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 260 | 399 | 5.0E-18 | IPR035898 |
| SMART | SM00551 | TAZ_2 | 263 | 366 | 1.6E-8 | IPR000197 |
| SMART | SM00225 | BTB_4 | 87 | 187 | 0.0019 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 87 | 148 | 8.896306 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_039122293.1 | BTB/POZ and TAZ domain-containing protein 1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7I8KFB5 | BTB domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_05006587 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology