Basic Information
Locus ID:
gene.Cymno07g12020
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 23572226 | 23575360 | - | gene.Cymno07g12020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 101,794.41 Da | 37.64 | 88.45 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 865 | 3.52421E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 586 | 860 | 1.1E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 339 | 372 | 0.052 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 73 | 2.2E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 146 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 445 | 4.08E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 567 | 862 | 2.16E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 333 | 2.1E-69 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 552 | 662 | 4.6E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 460 | 8.9E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 888 | 4.9E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 266 | 289 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 422 | 444 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 171 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 218 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 585 | 866 | 2.0E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 122 | 145 | 0.026 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 866 | 41.573055 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 482 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015869073.1 | receptor-like kinase TMK4 [Ziziphus jujuba var. spinosa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P675 | Kinase-like protein OS=Zostera marina OX=29655 GN=ZOSMA_363G00040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology