Basic Information
Locus ID:
gene.Cymno07g10320
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 22108126 | 22109967 | + | gene.Cymno07g10320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 57,404.20 Da | 59.64 | 53.97 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 90 | 235 | 5.0E-20 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 93 | 185 | 6.3E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
| Coils | Coil | Coil | 401 | 421 | - | - |
| Coils | Coil | Coil | 431 | 451 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_043724828.1 | chromatin-remodeling ATPase INO80-like isoform X2 [Telopea speciosissima] | 0 |
| TrEMBL | A0A0K9PVS6 | Sequence-specific DNA binding transcription factor OS=Zostera marina OX=29655 GN=ZOSMA_166G00570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology