Basic Information
Locus ID:
gene.Cymno07g08330
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19926287 | 19992440 | + | gene.Cymno07g08330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 66,969.48 Da | 44.65 | 85.88 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 315 | 577 | 2.17732E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 311 | 576 | 3.2E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 577 | 1.62E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 590 | 8.5E-59 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 42 | 98 | 1.6E-5 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 379 | 1.1E-25 | - |
| SMART | SM00257 | LysM_2 | 107 | 153 | 7.4 | IPR018392 |
| SMART | SM00220 | serkin_6 | 309 | 578 | 7.2E-40 | IPR000719 |
| SMART | SM00257 | LysM_2 | 43 | 91 | 0.089 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 580 | 40.371662 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 42 | 90 | 8.655602 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 315 | 336 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_020088829.1 | lysM domain receptor-like kinase 3 isoform X1 [Ananas comosus] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5EZ46 | lysM domain receptor-like kinase 3 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109710561 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology