Basic Information
Locus ID:
gene.Cymno07g08320
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19888560 | 19924149 | + | gene.Cymno07g08320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 71,217.39 Da | 44.55 | 92.33 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 355 | 620 | 3.04527E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 351 | 616 | 1.6E-45 | IPR001245 |
| Pfam | PF01476 | LysM domain | 148 | 190 | 0.0027 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 330 | 617 | 2.02E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 635 | 1.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 419 | 9.5E-26 | - |
| SMART | SM00220 | serkin_6 | 349 | 618 | 1.6E-38 | IPR000719 |
| SMART | SM00257 | LysM_2 | 83 | 131 | 0.16 | IPR018392 |
| SMART | SM00257 | LysM_2 | 147 | 193 | 1.1 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 349 | 620 | 40.640209 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 464 | 476 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 355 | 376 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_020088829.1 | lysM domain receptor-like kinase 3 isoform X1 [Ananas comosus] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5EZ46 | lysM domain receptor-like kinase 3 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109710561 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology