Basic Information
Locus ID:
gene.Cymno07g08230
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19791443 | 19794345 | - | gene.Cymno07g08230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 79,532.33 Da | 51.20 | 69.76 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07843 | STKc_CDC2L1 | 353 | 650 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 359 | 650 | 1.3E-75 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 656 | 5.4E-101 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 441 | 1.0E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 679 | 6.4E-74 | - |
| SMART | SM00220 | serkin_6 | 359 | 650 | 5.8E-103 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 650 | 48.004025 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 252 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_026663350.1 | cyclin-dependent kinase G-2 isoform X1 [Phoenix dactylifera] | 0 |
| A2XUW1 | Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B8J8L9 | cyclin-dependent kinase OS=Phoenix dactylifera OX=42345 GN=LOC103714762 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg34538, jg6974, jg9566 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_14028, gene_3533 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah001971, Ah005524, Ah013849, Ah013898 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_4g078040, BVRB_5g110640, BVRB_6g151410 |
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg32561, Sbi_jg32562, Sbi_jg32568, Sbi_jg32570 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg11202, Seu_jg7525 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00002599, GOSA_00017220 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl35072, Sgl40457, Sgl53233, Sgl58495 |
| Amaranthaceae | Chenopodium album | 9 | gene:ENSEOMG00000000231, gene:ENSEOMG00000005153 ... |
| Amaranthaceae | Chenopodium quinoa | 6 | CQ.Regalona.r1.4AG0006190, CQ.Regalona.r1.4BG0006340 ... |
| Anacardiaceae | Pistacia vera | 4 | pistato.v30140920, pistato.v30141430, pistato.v30223570 ... |
| Apiaceae | Apium graveolens | 9 | Ag10G01211, Ag10G01214, Ag10G01215, Ag4G01407, Ag5G01941 ... |
| Arecaceae | Cocos nucifera | 3 | COCNU_02G013000, scaffold009612G000010 ... |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103714762, gene-LOC103719868 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2001.V1.1, AsparagusV1_09.618.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri18G11566, Ftri1G29156, Ftri8G32205, Ftri9G14122 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G67580.1, AT5G63370.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10003850m.g.v1.0, Thhalv10010233m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g26460.v2.2, Sp5g13470.v2.2, Sp5g22600.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g044790.2N, BniB04g001940.2N, BniB06g023760.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G1697, Ceq07G1265 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G1880, Cgl07G1340 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno07g08230, gene.Cymno08g04980 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0007s00016.v1.0, Dusal.0069s00015.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g15480, gene.Thate06g10700 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-11507, nbisL1-mrna-5586 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.724, evm.TU.LG10.1042 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00022226, Pov_00033718 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb0G38404, Lb1G07775 |
| Poaceae | Echinochloa crus-galli | 6 | AH07.2501, AH09.1383, BH07.2308, BH09.1566, CH07.2384 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0136530, gene-QOZ80_2BG0192090 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0177110.1, HORVU.MOREX.r3.6HG0592200.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_023499, gene-QYE76_044781 |
| Poaceae | Oryza coarctata | 4 | Oco03G014550, Oco04G015010, Oco07G009170, Oco08G009030 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g39010.1, LOC_Os04g41100.4 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G161900, gene-BS78_06G142200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204505, Pt_Chr0302306, Pt_Chr0307200 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr06G007850, Chr09G012370, Chr13G008300, Chr15G009510 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G602800, Tel6E01G416500 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG050100, gene_TRIDC6AG033190 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G346500.1, TraesCS2B02G364800.5 ... |
| Poaceae | Zea mays | 3 | Zm00001eb078950_P001, Zm00001eb246420_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-18605, nbis-gene-7336 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g16630, Zma_g21507 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG01.2822, evm.TU.LG03.1350, evm.TU.LG12.407 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g14870 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.60456.9, evm.TU.Scaffold_11_RagTag.1539 ... |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-12303, nbisL1-mrna-23207, nbisL1-mrna-27035 ... |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-11349, nbisL1-mrna-20628, nbisL1-mrna-9309 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-12686, nbisL1-mrna-14663, nbisL1-mrna-15556 ... |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000001l.467, evm.TU.utg000010l.187 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002422, Maker00006734, Maker00008894 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11190, nbisL1-mrna-676, nbisL1-mrna-7001 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-15962, nbisL1-mrna-17678, nbisL1-mrna-8763 |
| Salicaceae | Populus euphratica | 6 | populus_peu07639, populus_peu21674, populus_peu21675 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132616392, gene-LOC132641251 |
| Solanaceae | Solanum chilense | 1 | SOLCI001817000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020261 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.19733_chr07_+, STRG.5114_chr03_-, gene_11160, gene_6666 |
| Tamaricaceae | Tamarix chinensis | 3 | TC04G0731, TC08G2600, TC09G0870 |
| Zosteraceae | Zostera marina | 1 | Zosma05g07210.v3.1 |