Basic Information
Locus ID:
gene.Cymno07g01930
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 1166296 | 1171488 | + | gene.Cymno07g01930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 66,091.28 Da | 55.61 | 72.25 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 96 | 300 | 2.3E-71 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 341 | 567 | 4.8E-71 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 99 | 570 | 3.0E-227 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 359 | 533 | 3.0E-227 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 213 | 247 | 8.61564 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 178 | 212 | 8.911594 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 67 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_038989250.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PZC3 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_146G00650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology