HalophFGD

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Basic Information
Locus ID: gene.Cymno06g13390
Species & Taxonomic ID: Cymodocea nodosa & 55448
Genome Assembly: GCA_036874045.1
Description: KIP1-like protein
Maps and Mapping Data
Chromosome Start End Strand ID
Chr06 24463408 24477614 - gene.Cymno06g13390
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.95 195,084.13 Da 52.94 87.31 -0.74
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07765 KIP1-like protein 14 87 3.1E-38 IPR011684
ProSiteProfiles PS51774 Networked (NET) actin-binding (NAB) domain profile. 13 93 51.485287 IPR011684
MobiDBLite mobidb-lite consensus disorder prediction 1487 1505 - -
MobiDBLite mobidb-lite consensus disorder prediction 1466 1505 - -
MobiDBLite mobidb-lite consensus disorder prediction 201 255 - -
MobiDBLite mobidb-lite consensus disorder prediction 192 255 - -
Coils Coil Coil 871 898 - -
Coils Coil Coil 556 590 - -
Coils Coil Coil 920 940 - -
Coils Coil Coil 1133 1184 - -
Coils Coil Coil 406 475 - -
Coils Coil Coil 511 545 - -
Coils Coil Coil 619 702 - -
Coils Coil Coil 291 311 - -
Coils Coil Coil 221 262 - -
Coils Coil Coil 1018 1038 - -
Coils Coil Coil 948 975 - -
Coils Coil Coil 1066 1086 - -
Coils Coil Coil 1545 1565 - -
Coils Coil Coil 714 741 - -
Coils Coil Coil 315 356 - -
Coils Coil Coil 1246 1280 - -
Coils Coil Coil 1105 1125 - -
Coils Coil Coil 1636 1663 - -
Gene Ontology
Molecular Function:
GO:0003779 (actin binding)
KEGG Pathway
KO Term:
K20478 (golgin subfamily B member 1)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G14760.1 kinase interacting (KIP1-like) family protein. 0
RefSeq XP_008789995.2 protein NETWORKED 1A-like [Phoenix dactylifera] 0
Swiss-Prot F4JIF4 Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1 0
TrEMBL A0A0K9NIP2 NAB domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_9G00650 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 11 jg11153, jg12593, jg27868, jg35332, jg35342, jg35343, jg5755 ...
jg8768, jg8769, jg8772, jg8773
Aizoaceae Mesembryanthemum crystallinum 2 gene_13546, gene_15535
Amaranthaceae Atriplex hortensis 1 Ah000337
Amaranthaceae Beta vulgaris 1 BVRB_5g119750
Amaranthaceae Salicornia bigelovii 4 Sbi_jg30762, Sbi_jg51788, Sbi_jg5526, Sbi_jg58496
Amaranthaceae Salicornia europaea 2 Seu_jg13373, Seu_jg28368
Amaranthaceae Suaeda aralocaspica 2 GOSA_00004942, GOSA_00020301
Amaranthaceae Suaeda glauca 4 Sgl04432, Sgl09503, Sgl53769, Sgl59033
Amaranthaceae Chenopodium album 7 gene:ENSEOMG00000005319, gene:ENSEOMG00000007845 ...
gene:ENSEOMG00000009846, gene:ENSEOMG00000022748, gene:ENSEOMG00000023186, gene:ENSEOMG00000029781, gene:ENSEOMG00000045649
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0014870, CQ.Regalona.r1.3BG0015130 ...
CQ.Regalona.r1.5AG0025140, CQ.Regalona.r1.5BG0026650
Anacardiaceae Pistacia vera 3 pistato.v30026780, pistato.v30109790, pistato.v30236420
Apiaceae Apium graveolens 7 Ag10G00717, Ag11G04090, Ag1G01840, Ag5G02517, Ag5G02518 ...
AgUnG01294, AgUnG01477
Arecaceae Cocos nucifera 4 COCNU_03G001360, COCNU_06G015610, COCNU_08G000860 ...
COCNU_14G011460
Arecaceae Phoenix dactylifera 4 gene-LOC103704582, gene-LOC103707334, gene-LOC103718097 ...
gene-LOC103723807
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.531.V1.1, AsparagusV1_08.1877.V1.1
Asteraceae Flaveria trinervia 3 Ftri11G13138, Ftri12G25254, Ftri12G33378
Brassicaceae Arabidopsis thaliana 4 AT1G03080.1, AT3G22790.1, AT4G02710.1, AT4G14760.1
Brassicaceae Eutrema salsugineum 4 Thhalv10006534m.g.v1.0, Thhalv10019883m.g.v1.0 ...
Thhalv10024203m.g.v1.0, Thhalv10028372m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp1g02080.v2.2, Sp3g20490.v2.2, Sp7g12890.v2.2
Brassicaceae Brassica nigra 10 BniB01g027290.2N, BniB01g039680.2N, BniB02g001100.2N ...
BniB03g038510.2N, BniB03g038530.2N, BniB03g038540.2N, BniB03g038550.2N, BniB05g021330.2N, BniB07g049070.2N, BniB08g045350.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq06G2085, Ceq07G0329
Casuarinaceae Casuarina glauca 2 Cgl06G2199, Cgl07G0337
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno01g00940, gene.Cymno06g13390
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g15190, gene.Thate02g28540, gene.Thate08g10660
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-6316, nbisL1-mrna-9674
Nitrariaceae Nitraria sibirica 2 evm.TU.LG04.1125, evm.TU.LG11.989
Plantaginaceae Plantago ovata 2 Pov_00025927, Pov_00035226
Plumbaginaceae Limonium bicolor 6 Lb1G08038, Lb1G08042, Lb2G10338, Lb3G18430, Lb5G28932 ...
Lb5G28933
Poaceae Echinochloa crus-galli 9 AH01.1224, AH01.1883, AH05.3993, BH01.1499, BH01.2356 ...
BH05.4083, CH01.2440, CH05.4302, CH06.2621
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_2AG0124930, gene-QOZ80_2BG0180530 ...
gene-QOZ80_3AG0224770, gene-QOZ80_3BG0270020, gene-QOZ80_5AG0397180, gene-QOZ80_5BG0445670
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.1HG0037250.1, HORVU.MOREX.r3.4HG0402000.1 ...
HORVU.MOREX.r3.5HG0432280.1, HORVU.MOREX.r3.5HG0508870.1
Poaceae Lolium multiflorum 7 gene-QYE76_000759, gene-QYE76_045157, gene-QYE76_045227 ...
gene-QYE76_063492, gene-QYE76_070585, gene-QYE76_070611, gene-QYE76_070612
Poaceae Oryza coarctata 8 Oco05G003510, Oco05G018670, Oco06G003570, Oco06G019450 ...
Oco19G004480, Oco20G004450, Oco23G010040, Oco24G009790
Poaceae Oryza sativa 4 LOC_Os03g06510.1, LOC_Os03g43684.1, LOC_Os10g28610.1 ...
LOC_Os12g41200.1
Poaceae Paspalum vaginatum 3 gene-BS78_01G147100, gene-BS78_01G230700 ...
gene-BS78_08G138700
Poaceae Puccinellia tenuiflora 4 Pt_Chr0101211, Pt_Chr0104459, Pt_Chr0502410, Pt_Chr0704322
Poaceae Sporobolus alterniflorus 12 Chr01G009710, Chr04G018690, Chr04G024700, Chr06G014010 ...
Chr06G019480, Chr07G023480, Chr09G009440, Chr12G027310, Chr13G015630, Chr15G014790, Chr19G007950, Chr27G008700
Poaceae Thinopyrum elongatum 4 Tel1E01G259400, Tel4E01G464400, Tel5E01G119900 ...
Tel5E01G600300
Poaceae Triticum dicoccoides 8 gene_TRIDC1AG020790, gene_TRIDC1BG024500 ...
gene_TRIDC4AG003970, gene_TRIDC4BG047750, gene_TRIDC5AG008260, gene_TRIDC5AG055200, gene_TRIDC5BG010210, gene_TRIDC5BG059210
Poaceae Triticum aestivum 12 TraesCS1A02G138400.1, TraesCS1B02G152200.2 ...
TraesCS1D02G135200.2, TraesCS4A02G029000.1, TraesCS4B02G276800.2, TraesCS4D02G275400.1, TraesCS5A02G054300.1, TraesCS5A02G377100.1, TraesCS5B02G062100.1, TraesCS5B02G380700.1, TraesCS5D02G065600.1, TraesCS5D02G387100.1
Poaceae Zea mays 7 Zm00001eb031290_P001, Zm00001eb047830_P003 ...
Zm00001eb050880_P001, Zm00001eb135720_P002, Zm00001eb222880_P001, Zm00001eb222900_P001, Zm00001eb222910_P001
Poaceae Zoysia japonica 4 nbis-gene-28005, nbis-gene-39648, nbis-gene-44566 ...
nbis-gene-47555
Poaceae Zoysia macrostachya 5 Zma_g13268, Zma_g16063, Zma_g25304, Zma_g26097, Zma_g899
Portulacaceae Portulaca oleracea 6 evm.TU.LG01.2325, evm.TU.LG02.1105, evm.TU.LG03.2120 ...
evm.TU.LG06.1785, evm.TU.LG09.870, evm.TU.LG11.1138
Posidoniaceae Posidonia oceanica 1 gene.Posoc03g01970
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_3_RagTag.412, evm.TU.Scaffold_5_RagTag.1016 ...
evm.TU.Scaffold_6_RagTag.780, evm.TU.Scaffold_9_RagTag.939
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-11331, nbisL1-mrna-1508, nbisL1-mrna-15916 ...
nbisL1-mrna-21270
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-16770, nbisL1-mrna-18846, nbisL1-mrna-19887 ...
nbisL1-mrna-7033
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-10365, nbisL1-mrna-18373, nbisL1-mrna-6148 ...
nbisL1-mrna-653
Rhizophoraceae Kandelia candel 4 evm.TU.utg000003l.510, evm.TU.utg000006l.324 ...
evm.TU.utg000011l.476, evm.TU.utg000019l.973
Rhizophoraceae Kandelia obovata 4 Maker00007956, Maker00009159, Maker00012917, Maker00013550
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-1497, nbisL1-mrna-15291, nbisL1-mrna-9964
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-3503, nbisL1-mrna-3504, nbisL1-mrna-5117 ...
nbisL1-mrna-7637
Salicaceae Populus euphratica 10 populus_peu07415, populus_peu15077, populus_peu15078 ...
populus_peu15079, populus_peu15080, populus_peu21426, populus_peu21427, populus_peu21428, populus_peu21429, populus_peu32739
Solanaceae Lycium barbarum 3 gene-LOC132610256, gene-LOC132610825, gene-LOC132635420
Solanaceae Solanum chilense 3 SOLCI002373800, SOLCI005846500, SOLCI006862000
Solanaceae Solanum pennellii 3 gene-LOC107001225, gene-LOC107030912, gene-LOC107030962
Tamaricaceae Reaumuria soongarica 3 STRG.2243_chr01_-, STRG.4016_chr02_+, gene_16425
Tamaricaceae Tamarix chinensis 4 TC01G0823, TC02G0203, TC07G2651, TC12G1370
Zosteraceae Zostera marina 3 Zosma04g00410.v3.1, Zosma05g28500.v3.1, Zosma06g26440.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.