Basic Information
Locus ID:
gene.Cymno06g11650
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the copper topaquinone oxidase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 23207241 | 23209766 | + | gene.Cymno06g11650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 76,136.99 Da | 41.69 | 79.96 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 23 | 120 | 1.2E-14 | IPR015800 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 249 | 660 | 1.1E-133 | IPR015798 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 126 | 228 | 5.1E-18 | IPR015802 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 124 | 235 | 1.67E-30 | IPR016182 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 240 | 664 | 8.24E-140 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 22 | 122 | 6.21E-19 | IPR016182 |
| Gene3D | G3DSA:3.10.450.40 | - | 127 | 227 | 4.2E-27 | - |
| Gene3D | G3DSA:3.10.450.40 | - | 21 | 126 | 2.0E-23 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 255 | 668 | 2.6E-151 | IPR036460 |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 621 | 634 | - | IPR000269 |
| ProSitePatterns | PS01164 | Copper amine oxidase topaquinone signature. | 399 | 412 | - | IPR000269 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31690.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_010935528.1 | primary amine oxidase [Elaeis guineensis] | 0 |
| F4IAX0 | Amine oxidase [copper-containing] alpha 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=CuAOalpha2 PE=1 SV=1 | 0 | |
| TrEMBL | D7T6W4 | Amine oxidase OS=Vitis vinifera OX=29760 GN=VIT_05s0020g03280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology