Basic Information
Locus ID:
gene.Cymno06g10920
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 22618040 | 22626780 | - | gene.Cymno06g10920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 58,753.82 Da | 57.60 | 55.15 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 257 | 312 | 6.5E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 426 | 483 | 6.5E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 254 | 315 | 1.7E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 417 | 485 | 1.02E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 410 | 486 | 1.3E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 241 | 316 | 3.9E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 425 | 484 | 3.7E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 256 | 314 | 8.5E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 420 | 485 | 37.516239 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 251 | 315 | 23.410515 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | NP_001268110.1 | DNA binding protein WRKY2 [Vitis vinifera] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7AE91 | Putative DNA binding protein WRKY2 OS=Davidia involucrata OX=16924 GN=Din_023689 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology