Basic Information
Locus ID:
gene.Cymno06g10780
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 22471225 | 22476060 | + | gene.Cymno06g10780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 23,426.46 Da | 48.29 | 71.37 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 23 | 127 | 6.6E-20 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 135 | 190 | 3.65E-10 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 4 | 136 | 1.5E-25 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 137 | 190 | 6.6E-12 | IPR013083 |
| SMART | SM00249 | PHD_3 | 140 | 187 | 0.0028 | IPR001965 |
| SMART | SM00439 | BAH_4 | 21 | 137 | 2.1E-26 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 136 | 19.934519 | IPR001025 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_028063125.1 | chromatin remodeling protein EBS-like isoform X2 [Camellia sinensis] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FKY9 | Chromatin remodeling protein EBS-like OS=Asparagus officinalis OX=4686 GN=A4U43_C01F1690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology