Basic Information
Locus ID:
gene.Cymno06g09670
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 21738177 | 21744482 | - | gene.Cymno06g09670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 92,485.45 Da | 41.19 | 81.73 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 491 | 785 | 2.53551E-123 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 460 | 771 | 1.9E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 491 | 796 | 1.32E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 494 | 789 | 1.8E-46 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 238 | - | - |
| Coils | Coil | Coil | 422 | 442 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039130667.1 | probable galacturonosyltransferase 4 isoform X1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A059CE99 | Hexosyltransferase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D00963 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology