Basic Information
Locus ID:
gene.Cymno06g09320
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 21504118 | 21507711 | - | gene.Cymno06g09320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 131,435.63 Da | 34.41 | 99.49 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 287 | 348 | 9.3E-8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 163 | 179 | 0.43 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 895 | 1164 | 7.7E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 676 | 732 | 7.6E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 531 | 591 | 2.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 64 | 8.8E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 874 | 1166 | 5.33E-76 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 121 | 485 | 3.06E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 430 | 787 | 2.38E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 163 | 787 | 1.1E-238 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 970 | 1183 | 2.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 859 | 969 | 6.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 14 | 121 | 5.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 612 | 669 | 1.1E-238 | - |
| SMART | SM00220 | serkin_6 | 894 | 1166 | 3.5E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 894 | 1169 | 38.124359 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 900 | 923 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1017 | 1029 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_044948689.1 | brassinosteroid LRR receptor kinase BRL1-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YRC4 | non-specific serine/threonine protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology