Basic Information
Locus ID:
gene.Cymno06g07760
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 20121699 | 20136821 | - | gene.Cymno06g07760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 71,631.49 Da | 49.59 | 77.87 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 411 | 457 | 4.06E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 71 | 229 | 2.02E-5 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 410 | 460 | 4.9E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 580 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_009380797.1 | PREDICTED: titin homolog isoform X4 [Musa acuminata subsp. malaccensis] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A804KZQ1 | Tudor domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103969094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology