Basic Information
Locus ID:
gene.Cymno06g07300
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 19692183 | 19696018 | - | gene.Cymno06g07300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 68,981.57 Da | 40.75 | 96.09 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 5.2E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 75 | 131 | 7.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 301 | 566 | 3.0E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 566 | 1.31E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 193 | 3.27E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 3.1E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 373 | 1.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 577 | 3.0E-59 | - |
| SMART | SM00220 | serkin_6 | 298 | 552 | 3.0E-32 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 552 | 34.95834 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 626 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 601 | 626 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010914291.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Elaeis guineensis] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PTY9 | Receptor-like kinase OS=Zostera marina OX=29655 GN=ZOSMA_164G00280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology