Basic Information
Locus ID:
gene.Cymno06g03290
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 2054751 | 2061205 | - | gene.Cymno06g03290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 65,716.91 Da | 36.95 | 72.20 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 23 | 235 | 5.1E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 287 | 7.55E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 317 | 4.6E-61 | - |
| SMART | SM00220 | serkin_6 | 23 | 272 | 3.9E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 279 | 22.97271 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 57 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010267168.1 | PREDICTED: casein kinase 1-like protein HD16 isoform X1 [Nelumbo nucifera] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1ZC52 | Casein kinase I hhp1 OS=Anthurium amnicola OX=1678845 GN=hhp1_11 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g03290 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g22330 |