Basic Information
Locus ID:
gene.Cymno06g02560
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 1589518 | 1592884 | - | gene.Cymno06g02560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 77,986.25 Da | 38.90 | 81.90 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 10 | 145 | 2.27505E-47 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 653 | 3.0E-40 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 13 | 118 | 4.6E-8 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 653 | 3.83E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 121 | 1.84E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 469 | 1.5E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 685 | 1.2E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 9 | 134 | 5.2E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 397 | 660 | 2.1E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 660 | 34.774601 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 515 | 527 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 696 | - | - |
| Coils | Coil | Coil | 263 | 318 | - | - |
| Coils | Coil | Coil | 323 | 343 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019706942.2 | U-box domain-containing protein 52 [Elaeis guineensis] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J0PJE6 | U-box domain-containing protein 52 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105047692 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology