Basic Information
Locus ID:
gene.Cymno05g20000
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 25527665 | 25533608 | + | gene.Cymno05g20000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 53,442.21 Da | 41.75 | 69.71 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 122 | 391 | 1.77773E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 119 | 386 | 2.8E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 414 | 1.05E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 193 | 7.8E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 194 | 416 | 8.0E-58 | - |
| SMART | SM00220 | serkin_6 | 116 | 390 | 2.6E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 390 | 38.477707 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 144 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58940.1 | calmodulin-binding receptor-like cytoplasmic kinase 1. Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA | 0 |
| RefSeq | XP_028087762.1 | calmodulin-binding receptor-like cytoplasmic kinase 1 isoform X2 [Camellia sinensis] | 0 |
| Q9FIL7 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4EA88 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_027479 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology