Basic Information
Locus ID:
gene.Cymno05g19020
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 24920539 | 24923281 | + | gene.Cymno05g19020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 51,710.08 Da | 40.65 | 74.98 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 316 | 1.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 362 | 0.0011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 412 | 447 | 2.2E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 151 | 448 | 1.65E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 141 | 451 | 3.1E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 365 | 405 | 400.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 148 | 189 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 236 | 273 | 3.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 408 | 447 | 3.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 277 | 316 | 1.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 194 | 233 | 0.35 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 362 | 3.8E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 327 | 371 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 415 | 448 | 14.217871 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 415 | 448 | 11.761044 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 284 | 325 | 13.215325 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 284 | 316 | 10.943775 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 434 | 448 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 349 | 363 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_038980090.1 | protein FIZZY-RELATED 3-like [Phoenix dactylifera] | 0 |
| Q8LPL5 | Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=FZR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5EUK4 | protein FIZZY-RELATED 3 OS=Ananas comosus OX=4615 GN=LOC109709378 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology