Basic Information
Locus ID:
gene.Cymno05g16250
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
AFC1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 23000017 | 23003673 | + | gene.Cymno05g16250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 51,144.52 Da | 40.15 | 89.91 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 83 | 424 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 96 | 424 | 3.0E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 83 | 428 | 1.3E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 176 | 1.7E-113 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 424 | 1.7E-113 | - |
| SMART | SM00220 | serkin_6 | 96 | 424 | 2.1E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 96 | 424 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 102 | 125 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_031248681.1 | serine/threonine-protein kinase AFC1 [Pistacia vera] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J1ARL5 | serine/threonine-protein kinase AFC1 isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110420215 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology