Basic Information
Locus ID:
gene.Cymno05g16210
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
cation transmembrane transporter activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 22956915 | 22961734 | - | gene.Cymno05g16210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 45,614.38 Da | 46.21 | 96.79 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 118 | 310 | 8.0E-30 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 319 | 390 | 4.0E-14 | IPR027470 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 110 | 311 | 1.29E-40 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 314 | 391 | 4.05E-18 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 114 | 309 | 4.2E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 312 | 392 | 6.7E-20 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 115 | 391 | 2.0E-33 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_010922408.1 | metal tolerance protein 5 isoform X1 [Elaeis guineensis] | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RA70 | metal tolerance protein 5 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105045735 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology