Basic Information
Locus ID:
gene.Cymno05g15670
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 22468825 | 22471648 | - | gene.Cymno05g15670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 79,732.88 Da | 37.86 | 83.32 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 408 | 687 | 4.9445E-92 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 39 | 270 | 5.28238E-70 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 40 | 273 | 5.5E-55 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 404 | 617 | 7.7E-49 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 39 | 270 | 4.66E-57 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 714 | 1.08E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 481 | 4.5E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 37 | 277 | 6.5E-61 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 708 | 3.7E-60 | - |
| SMART | SM00220 | serkin_6 | 402 | 687 | 7.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 695 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 531 | 543 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 431 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 153 | 159 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 327 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_029123945.1 | L-type lectin-domain containing receptor kinase VIII.1 [Elaeis guineensis] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NRF8 | Putative Kinase OS=Zostera marina OX=29655 GN=ZOSMA_75G00080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology