Basic Information
Locus ID:
gene.Cymno05g14420
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Calcium calmodulin-dependent serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 21576711 | 21581969 | - | gene.Cymno05g14420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 64,531.22 Da | 38.91 | 79.69 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 123 | 384 | 5.13757E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 123 | 385 | 5.5E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 416 | 565 | 5.64E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 404 | 4.45E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 404 | 494 | 2.4E-15 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 410 | 564 | 2.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 213 | 395 | 1.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 212 | 1.6E-23 | - |
| SMART | SM00220 | serkin_6 | 123 | 385 | 1.0E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 385 | 49.68597 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 9.492233 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 155 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 66 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_010909915.1 | CDPK-related kinase 7 isoform X2 [Elaeis guineensis] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QK82 | CDPK-related kinase 7 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105035902 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology