Basic Information
Locus ID:
gene.Cymno05g13010
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 20542669 | 20544669 | - | gene.Cymno05g13010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 72,730.16 Da | 42.20 | 85.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 354 | 619 | 1.0E-46 | IPR000719 |
| Pfam | PF19160 | SPARK | 29 | 197 | 1.4E-10 | IPR043891 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 332 | 622 | 2.7E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 646 | 1.6E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 321 | 425 | 3.1E-27 | - |
| SMART | SM00220 | serkin_6 | 353 | 627 | 8.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 626 | 38.717987 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 654 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_026664565.2 | proline-rich receptor-like protein kinase PERK3 [Phoenix dactylifera] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1YBS1 | Receptor-like protein kinase FERONIA (Fragment) OS=Anthurium amnicola OX=1678845 GN=FER_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | scaffold024094G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717896 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g13010 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g29490 |
| Poaceae | Oryza coarctata | 1 | Oco14G004500 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g12480.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G104200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G003910, Chr28G003360 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-49353 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g4928 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g27770 |